WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28B12.2b Sequence Name  F28B12.2b
Length (nt)  1437   Chromosome Location  II: 5936441-5936484
Chromosome . Primary Identifier  II Chromosome Location . Start  5936441
Chromosome Location . End  5936484
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B12.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45037 EGL-44, isoform b 52.8 478 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00089841
WBRNAi00045781
WBRNAi00014028
WBRNAi00086261
WBRNAi00089990
WBRNAi00090149
WBRNAi00090308
WBRNAi00090569

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28B12.2b 5936441 5936484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001208 egl-44 F28B12.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28B12.2b 5936441 5936484 1
CDS:F28B12.2b 5936572 5936665 1
CDS:F28B12.2b 5937053 5937251 1
CDS:F28B12.2b 5938537 5938685 1
CDS:F28B12.2b 5938738 5938921 1
CDS:F28B12.2b 5938978 5939353 1
CDS:F28B12.2b 5939410 5939518 1
CDS:F28B12.2b 5939569 5939721 1
CDS:F28B12.2b 5940100 5940228 1

1 Sequence

Length
1437

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28B12.2b.2 F28B12.2b.2 2100   II: 5928802-5940821
Transcript:F28B12.2b.3 F28B12.2b.3 2126   II: 5933486-5940821
Transcript:F28B12.2b.1 F28B12.2b.1 2024   II: 5936441-5940815