WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0034.3d Sequence Name  B0034.3d
Length (nt)  543   Chromosome Location  II: 5945855-5946014
Chromosome . Primary Identifier  II Chromosome Location . Start  5945855
Chromosome Location . End  5946014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0034.3d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54496 CASY-1, isoform d 20.1 180 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00027950

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0034.3d 5945855 5946014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0034.3d 5945855 5946014 -1
CDS:B0034.3d 5946480 5946613 -1
CDS:B0034.3d 5946889 5947007 -1
CDS:B0034.3d 5947234 5947315 -1
CDS:B0034.3d 5947469 5947516 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0034.3d.1 B0034.3d.1 543   II: 5945855-5947516