WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21H12.1.1 Sequence Name  F21H12.1.1
Length (nt)  1428   Chromosome Location  II: 6097830-6099645
Chromosome . Primary Identifier  II Chromosome Location . Start  6097830
Chromosome Location . End  6099645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21H12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017683 rbbp-5 F21H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21H12.1 F21H12.1 1365   II: 6097832-6097903

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21H12.1.1 6097830 6099645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52253   74   II: 6097830-6097903 Caenorhabditis elegans
Exon52254   111   II: 6098043-6098153 Caenorhabditis elegans
Exon52255   248   II: 6098202-6098449 Caenorhabditis elegans
Exon52256   851   II: 6098502-6099352 Caenorhabditis elegans
Exon52258   144   II: 6099502-6099645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21H12.1.1 6097830 6099645 1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
transcript