WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29H12.5.1 Sequence Name  C29H12.5.1
Length (nt)  2169   Chromosome Location  II: 6110448-6113194
Chromosome . Primary Identifier  II Chromosome Location . Start  6110448
Chromosome Location . End  6113194 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29H12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016236 heri-1 C29H12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29H12.5 C29H12.5 2010   II: 6110593-6110846

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29H12.5.1 6110448 6113194 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52291   399   II: 6110448-6110846 Caenorhabditis elegans
Exon52292   139   II: 6110893-6111031 Caenorhabditis elegans
Exon52293   318   II: 6111215-6111532 Caenorhabditis elegans
Exon52294   526   II: 6111578-6112103 Caenorhabditis elegans
Exon52295   141   II: 6112151-6112291 Caenorhabditis elegans
Exon52296   77   II: 6112353-6112429 Caenorhabditis elegans
Exon52297   378   II: 6112480-6112857 Caenorhabditis elegans
Exon52298   57   II: 6112903-6112959 Caenorhabditis elegans
Exon52299   64   II: 6113013-6113076 Caenorhabditis elegans
Exon52300   70   II: 6113125-6113194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29H12.5.1 6110448 6113194 -1

1 Sequence

Length
2169

1 Sequence Ontology Term

Identifier Name Description
transcript