WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32D5.6.1 Sequence Name  C32D5.6.1
Length (nt)  1915   Chromosome Location  II: 6331820-6333987
Chromosome . Primary Identifier  II Chromosome Location . Start  6331820
Chromosome Location . End  6333987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32D5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016314 ttc-39B C32D5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32D5.6 C32D5.6 1737   II: 6331977-6332184

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32D5.6.1 6331820 6333987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52956   365   II: 6331820-6332184 Caenorhabditis elegans
Exon52957   504   II: 6332226-6332729 Caenorhabditis elegans
Exon52958   223   II: 6332804-6333026 Caenorhabditis elegans
Exon52959   608   II: 6333073-6333680 Caenorhabditis elegans
Exon52960   105   II: 6333725-6333829 Caenorhabditis elegans
Exon52961   110   II: 6333878-6333987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32D5.6.1 6331820 6333987 -1

1 Sequence

Length
1915

1 Sequence Ontology Term

Identifier Name Description
transcript