WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10B2.5.1 Sequence Name  K10B2.5.1
Length (nt)  3555   Chromosome Location  II: 6361159-6365367
Chromosome . Primary Identifier  II Chromosome Location . Start  6361159
Chromosome Location . End  6365367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019608 ani-2 K10B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10B2.5 K10B2.5 3030   II: 6361596-6361680

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10B2.5.1 6361159 6365367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53021   522   II: 6361159-6361680 Caenorhabditis elegans
Exon53022   575   II: 6361753-6362327 Caenorhabditis elegans
Exon53023   176   II: 6362383-6362558 Caenorhabditis elegans
Exon53024   613   II: 6362607-6363219 Caenorhabditis elegans
Exon53025   415   II: 6363264-6363678 Caenorhabditis elegans
Exon53026   183   II: 6363727-6363909 Caenorhabditis elegans
Exon53027   187   II: 6364076-6364262 Caenorhabditis elegans
Exon53028   119   II: 6364306-6364424 Caenorhabditis elegans
Exon53029   153   II: 6364469-6364621 Caenorhabditis elegans
Exon53030   148   II: 6364667-6364814 Caenorhabditis elegans
Exon53031   289   II: 6364857-6365145 Caenorhabditis elegans
Exon53032   175   II: 6365193-6365367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10B2.5.1 6361159 6365367 -1

1 Sequence

Length
3555

1 Sequence Ontology Term

Identifier Name Description
transcript