WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K10B2.2a Sequence Name  K10B2.2a
Length (nt)  1413   Chromosome Location  II: 6367004-6367333
Chromosome . Primary Identifier  II Chromosome Location . Start  6367004
Chromosome Location . End  6367333
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02009 CTSA-4.1, isoform a 53.1 470 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00034226
WBRNAi00001949
WBRNAi00050472
WBRNAi00016945
WBRNAi00076567
WBRNAi00089118
WBRNAi00115160

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K10B2.2a 6367004 6367333 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019605 ctsa-4.1 K10B2.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:K10B2.2a 6367004 6367333 1
CDS:K10B2.2a 6367379 6367719 1
CDS:K10B2.2a 6367943 6368045 1
CDS:K10B2.2a 6368089 6368235 1
CDS:K10B2.2a 6368282 6368391 1
CDS:K10B2.2a 6368503 6368584 1
CDS:K10B2.2a 6368629 6368715 1
CDS:K10B2.2a 6368762 6368849 1
CDS:K10B2.2a 6368896 6369020 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K10B2.2a.1 K10B2.2a.1 1492   II: 6366996-6369091