WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A1.6d.1 Sequence Name  K06A1.6d.1
Length (nt)  2628   Chromosome Location  II: 6456857-6466534
Chromosome . Primary Identifier  II Chromosome Location . Start  6456857
Chromosome Location . End  6466534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A1.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019428 dgk-5 K06A1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A1.6d K06A1.6d 2628   II: 6456857-6456959

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A1.6d.1 6456857 6466534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53240   103   II: 6456857-6456959 Caenorhabditis elegans
Exon53244   172   II: 6457009-6457180 Caenorhabditis elegans
Exon53249   132   II: 6457361-6457492 Caenorhabditis elegans
Exon53254   334   II: 6457718-6458051 Caenorhabditis elegans
Exon53259   293   II: 6458109-6458401 Caenorhabditis elegans
Exon53264   149   II: 6458461-6458609 Caenorhabditis elegans
Exon53269   158   II: 6458669-6458826 Caenorhabditis elegans
Exon53274   552   II: 6458927-6459478 Caenorhabditis elegans
Exon53279   282   II: 6459680-6459961 Caenorhabditis elegans
Exon53284   106   II: 6460152-6460257 Caenorhabditis elegans
Exon53295   226   II: 6465528-6465753 Caenorhabditis elegans
Exon53296   121   II: 6466414-6466534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A1.6d.1 6456857 6466534 -1

1 Sequence

Length
2628

1 Sequence Ontology Term

Identifier Name Description
transcript