WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54H5.4a Sequence Name  F54H5.4a
Length (nt)  930   Chromosome Location  II: 6619385-6619475
Chromosome . Primary Identifier  II Chromosome Location . Start  6619385
Chromosome Location . End  6619475
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54H5.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01967 KLF-3, isoform a 35.1 309 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00089827
WBRNAi00048404
WBRNAi00114947
WBRNAi00099806
WBRNAi00089516
WBRNAi00114993
WBRNAi00100799
WBRNAi00099200
WBRNAi00099604
WBRNAi00099402
WBRNAi00115031
WBRNAi00032829
WBRNAi00100051
WBRNAi00100425
WBRNAi00115069
WBRNAi00115015
WBRNAi00100986
WBRNAi00115088
WBRNAi00090055
WBRNAi00092057
WBRNAi00100612
WBRNAi00087210
WBRNAi00114892
WBRNAi00100238
WBRNAi00115050
WBRNAi00115232
WBRNAi00090213
WBRNAi00089895

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54H5.4a 6619385 6619475 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003480 klf-3 F54H5.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54H5.4a 6619385 6619475 1
CDS:F54H5.4a 6619520 6619961 1
CDS:F54H5.4a 6621432 6621599 1
CDS:F54H5.4a 6621646 6621762 1
CDS:F54H5.4a 6621811 6621922 1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54H5.4a.1 F54H5.4a.1 1176   II: 6619385-6622168