WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54H5.14.1 Sequence Name  F54H5.14.1
Length (nt)  1348   Chromosome Location  II: 6623423-6625402
Chromosome . Primary Identifier  II Chromosome Location . Start  6623423
Chromosome Location . End  6625402 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54H5.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00255600 F54H5.14 F54H5.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54H5.14 F54H5.14 1275   II: 6623483-6623650

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54H5.14.1 6623423 6625402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53832   228   II: 6623423-6623650 Caenorhabditis elegans
Exon53833   76   II: 6623808-6623883 Caenorhabditis elegans
Exon53834   100   II: 6623932-6624031 Caenorhabditis elegans
Exon53835   80   II: 6624079-6624158 Caenorhabditis elegans
Exon53836   232   II: 6624203-6624434 Caenorhabditis elegans
Exon53837   104   II: 6624477-6624580 Caenorhabditis elegans
Exon53839   78   II: 6624637-6624714 Caenorhabditis elegans
Exon53840   167   II: 6624861-6625027 Caenorhabditis elegans
Exon53841   201   II: 6625075-6625275 Caenorhabditis elegans
Exon53842   82   II: 6625321-6625402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54H5.14.1 6623423 6625402 -1

1 Sequence

Length
1348

1 Sequence Ontology Term

Identifier Name Description
transcript