WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.4a.1 Sequence Name  T19D12.4a.1
Length (nt)  3264   Chromosome Location  II: 6631105-6637098
Chromosome . Primary Identifier  II Chromosome Location . Start  6631105
Chromosome Location . End  6637098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020579 T19D12.4 T19D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.4a T19D12.4a 3087   II: 6631168-6631339

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.4a.1 6631105 6637098 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53857   235   II: 6631105-6631339 Caenorhabditis elegans
Exon53859   121   II: 6631862-6631982 Caenorhabditis elegans
Exon53861   107   II: 6632029-6632135 Caenorhabditis elegans
Exon53863   120   II: 6632350-6632469 Caenorhabditis elegans
Exon53865   549   II: 6632518-6633066 Caenorhabditis elegans
Exon53867   149   II: 6633121-6633269 Caenorhabditis elegans
Exon53869   83   II: 6633319-6633401 Caenorhabditis elegans
Exon53871   407   II: 6633459-6633865 Caenorhabditis elegans
Exon53873   918   II: 6633912-6634829 Caenorhabditis elegans
Exon53876   58   II: 6634874-6634931 Caenorhabditis elegans
Exon53881   365   II: 6636356-6636720 Caenorhabditis elegans
Exon53886   152   II: 6636947-6637098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.4a.1 6631105 6637098 1

1 Sequence

Length
3264

1 Sequence Ontology Term

Identifier Name Description
transcript