WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.5.1 Sequence Name  T19D12.5.1
Length (nt)  1242   Chromosome Location  II: 6634856-6636236
Chromosome . Primary Identifier  II Chromosome Location . Start  6634856
Chromosome Location . End  6636236 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020580 T19D12.5 T19D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.5 T19D12.5 1086   II: 6634939-6635166

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.5.1 6634856 6636236 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53875   311   II: 6634856-6635166 Caenorhabditis elegans
Exon53878   264   II: 6635214-6635477 Caenorhabditis elegans
Exon53879   185   II: 6635526-6635710 Caenorhabditis elegans
Exon53880   482   II: 6635755-6636236 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.5.1 6634856 6636236 -1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
transcript