WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.9.1 Sequence Name  T19D12.9.1
Length (nt)  1498   Chromosome Location  II: 6652338-6654384
Chromosome . Primary Identifier  II Chromosome Location . Start  6652338
Chromosome Location . End  6654384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020583 T19D12.9 T19D12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.9 T19D12.9 1389   II: 6652412-6652675

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.9.1 6652338 6654384 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53918   338   II: 6652338-6652675 Caenorhabditis elegans
Exon53919   93   II: 6652723-6652815 Caenorhabditis elegans
Exon53920   252   II: 6652878-6653129 Caenorhabditis elegans
Exon53921   121   II: 6653177-6653297 Caenorhabditis elegans
Exon53922   149   II: 6653346-6653494 Caenorhabditis elegans
Exon53923   108   II: 6653546-6653653 Caenorhabditis elegans
Exon53924   106   II: 6653701-6653806 Caenorhabditis elegans
Exon53925   109   II: 6653855-6653963 Caenorhabditis elegans
Exon53926   104   II: 6654120-6654223 Caenorhabditis elegans
Exon53927   118   II: 6654267-6654384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.9.1 6652338 6654384 -1

1 Sequence

Length
1498

1 Sequence Ontology Term

Identifier Name Description
transcript