WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.10.1 Sequence Name  T19D12.10.1
Length (nt)  1528   Chromosome Location  II: 6655084-6658866
Chromosome . Primary Identifier  II Chromosome Location . Start  6655084
Chromosome Location . End  6658866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020584 T19D12.10 T19D12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.10 T19D12.10 1368   II: 6655190-6655447

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.10.1 6655084 6658866 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53928   364   II: 6655084-6655447 Caenorhabditis elegans
Exon53929   93   II: 6655660-6655752 Caenorhabditis elegans
Exon53930   252   II: 6655797-6656048 Caenorhabditis elegans
Exon53931   121   II: 6656094-6656214 Caenorhabditis elegans
Exon53932   149   II: 6656265-6656413 Caenorhabditis elegans
Exon53933   108   II: 6658125-6658232 Caenorhabditis elegans
Exon53934   106   II: 6658279-6658384 Caenorhabditis elegans
Exon53935   109   II: 6658433-6658541 Caenorhabditis elegans
Exon53936   104   II: 6658593-6658696 Caenorhabditis elegans
Exon53937   122   II: 6658745-6658866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.10.1 6655084 6658866 -1

1 Sequence

Length
1528

1 Sequence Ontology Term

Identifier Name Description
transcript