WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H43E16.1b.1 Sequence Name  H43E16.1b.1
Length (nt)  2880   Chromosome Location  II: 6674283-6679347
Chromosome . Primary Identifier  II Chromosome Location . Start  6674283
Chromosome Location . End  6679347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43E16.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019273 H43E16.1 H43E16.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H43E16.1b H43E16.1b 2790   II: 6674317-6674431

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H43E16.1b.1 6674283 6679347 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54012   149   II: 6674283-6674431 Caenorhabditis elegans
Exon54014   274   II: 6675376-6675649 Caenorhabditis elegans
Exon54016   134   II: 6675736-6675869 Caenorhabditis elegans
Exon54018   301   II: 6675913-6676213 Caenorhabditis elegans
Exon54020   137   II: 6676267-6676403 Caenorhabditis elegans
Exon54021   204   II: 6676447-6676650 Caenorhabditis elegans
Exon54023   1130   II: 6677473-6678602 Caenorhabditis elegans
Exon54025   140   II: 6678647-6678786 Caenorhabditis elegans
Exon54027   78   II: 6678844-6678921 Caenorhabditis elegans
Exon54029   72   II: 6678969-6679040 Caenorhabditis elegans
Exon54030   261   II: 6679087-6679347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H43E16.1b.1 6674283 6679347 1

1 Sequence

Length
2880

1 Sequence Ontology Term

Identifier Name Description
transcript