WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H43E16.1b Sequence Name  H43E16.1b
Length (nt)  2790   Chromosome Location  II: 6674317-6674431
Chromosome . Primary Identifier  II Chromosome Location . Start  6674317
Chromosome Location . End  6674431
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43E16.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52232 H43E16.1, isoform b 93.8 929 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00049561
WBRNAi00011040
WBRNAi00016355
WBRNAi00091119
WBRNAi00033788

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H43E16.1b 6674317 6674431 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019273 H43E16.1 H43E16.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:H43E16.1b 6674317 6674431 1
CDS:H43E16.1b 6675376 6675649 1
CDS:H43E16.1b 6675736 6675869 1
CDS:H43E16.1b 6675913 6676213 1
CDS:H43E16.1b 6676267 6676403 1
CDS:H43E16.1b 6676447 6676650 1
CDS:H43E16.1b 6677473 6678602 1
CDS:H43E16.1b 6678647 6678786 1
CDS:H43E16.1b 6678844 6678921 1
CDS:H43E16.1b 6678969 6679040 1
CDS:H43E16.1b 6679087 6679291 1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H43E16.1b.1 H43E16.1b.1 2880   II: 6674283-6679347