WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31E8.5.1 Sequence Name  F31E8.5.1
Length (nt)  1519   Chromosome Location  II: 6805018-6807262
Chromosome . Primary Identifier  II Chromosome Location . Start  6805018
Chromosome Location . End  6807262 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31E8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017955 F31E8.5 F31E8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31E8.5 F31E8.5 1419   II: 6805065-6805154

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31E8.5.1 6805018 6807262 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54483   137   II: 6805018-6805154 Caenorhabditis elegans
Exon54484   132   II: 6805201-6805332 Caenorhabditis elegans
Exon54485   83   II: 6805382-6805464 Caenorhabditis elegans
Exon54486   175   II: 6805510-6805684 Caenorhabditis elegans
Exon54487   171   II: 6805781-6805951 Caenorhabditis elegans
Exon54488   181   II: 6805999-6806179 Caenorhabditis elegans
Exon54489   110   II: 6806231-6806340 Caenorhabditis elegans
Exon54490   211   II: 6806386-6806596 Caenorhabditis elegans
Exon54491   108   II: 6806645-6806752 Caenorhabditis elegans
Exon54492   125   II: 6807004-6807128 Caenorhabditis elegans
Exon54493   86   II: 6807177-6807262 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31E8.5.1 6805018 6807262 -1

1 Sequence

Length
1519

1 Sequence Ontology Term

Identifier Name Description
transcript