WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31E8.2a.1 Sequence Name  F31E8.2a.1
Length (nt)  1785   Chromosome Location  II: 6810963-6816433
Chromosome . Primary Identifier  II Chromosome Location . Start  6810963
Chromosome Location . End  6816433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31E8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004921 snt-1 F31E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31E8.2a F31E8.2a 1326   II: 6810968-6811083

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31E8.2a.1 6810963 6816433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54494   121   II: 6810963-6811083 Caenorhabditis elegans
Exon54496   98   II: 6811889-6811986 Caenorhabditis elegans
Exon54498   182   II: 6813083-6813264 Caenorhabditis elegans
Exon54500   471   II: 6814091-6814561 Caenorhabditis elegans
Exon54502   118   II: 6814860-6814977 Caenorhabditis elegans
Exon54505   134   II: 6815304-6815437 Caenorhabditis elegans
Exon54506   104   II: 6815523-6815626 Caenorhabditis elegans
Exon54509   557   II: 6815877-6816433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31E8.2a.1 6810963 6816433 1

1 Sequence

Length
1785

1 Sequence Ontology Term

Identifier Name Description
transcript