WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0252.3c.1 Sequence Name  B0252.3c.1
Length (nt)  1419   Chromosome Location  II: 6903014-6907290
Chromosome . Primary Identifier  II Chromosome Location . Start  6903014
Chromosome Location . End  6907290 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0252.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015088 B0252.3 B0252.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0252.3c B0252.3c 1395   II: 6903014-6903187

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0252.3c.1 6903014 6907290 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54979   174   II: 6903014-6903187 Caenorhabditis elegans
Exon54986   93   II: 6903243-6903335 Caenorhabditis elegans
Exon54992   295   II: 6903849-6904143 Caenorhabditis elegans
Exon54998   216   II: 6904204-6904419 Caenorhabditis elegans
Exon55002   200   II: 6904481-6904680 Caenorhabditis elegans
Exon55009   368   II: 6904971-6905338 Caenorhabditis elegans
Exon55012   73   II: 6907218-6907290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0252.3c.1 6903014 6907290 -1

1 Sequence

Length
1419

1 Sequence Ontology Term

Identifier Name Description
transcript