WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F22D3.6 Sequence Name  F22D3.6
Length (nt)  1920   Chromosome Location  II: 6947976-6948308
Chromosome . Primary Identifier  II Chromosome Location . Start  6947976
Chromosome Location . End  6948308
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29773 MALT-1 74.0 639 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00045309
WBRNAi00013750
WBRNAi00031266
WBRNAi00117794
WBRNAi00117793
WBRNAi00112323
WBRNAi00112322

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F22D3.6 6947976 6948308 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017702 malt-1 F22D3.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F22D3.6 6947976 6948308 -1
CDS:F22D3.6 6948354 6948442 -1
CDS:F22D3.6 6948734 6948883 -1
CDS:F22D3.6 6948957 6949053 -1
CDS:F22D3.6 6949101 6949215 -1
CDS:F22D3.6 6949423 6949496 -1
CDS:F22D3.6 6949545 6949657 -1
CDS:F22D3.6 6949706 6949805 -1
CDS:F22D3.6 6950101 6950324 -1
CDS:F22D3.6 6950374 6950534 -1
CDS:F22D3.6 6950577 6950745 -1
CDS:F22D3.6 6950905 6950995 -1
CDS:F22D3.6 6951043 6951124 -1
CDS:F22D3.6 6951178 6951299 -1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F22D3.6.1 F22D3.6.1 2042   II: 6947855-6951300