WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15F1.3b.1 Sequence Name  C15F1.3b.1
Length (nt)  3529   Chromosome Location  II: 6958050-6965673
Chromosome . Primary Identifier  II Chromosome Location . Start  6958050
Chromosome Location . End  6965673 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006605 tra-2 C15F1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15F1.3b C15F1.3b 3444   II: 6958135-6958448

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.3b.1 6958050 6965673 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55379   399   II: 6958050-6958448 Caenorhabditis elegans
Exon55382   168   II: 6958952-6959119 Caenorhabditis elegans
Exon55384   103   II: 6959165-6959267 Caenorhabditis elegans
Exon55386   109   II: 6959313-6959421 Caenorhabditis elegans
Exon55388   95   II: 6961573-6961667 Caenorhabditis elegans
Exon55390   180   II: 6962012-6962191 Caenorhabditis elegans
Exon55392   74   II: 6962354-6962427 Caenorhabditis elegans
Exon55394   101   II: 6962476-6962576 Caenorhabditis elegans
Exon55396   95   II: 6962622-6962716 Caenorhabditis elegans
Exon55398   78   II: 6962762-6962839 Caenorhabditis elegans
Exon55400   97   II: 6962892-6962988 Caenorhabditis elegans
Exon55402   115   II: 6963048-6963162 Caenorhabditis elegans
Exon55404   264   II: 6963214-6963477 Caenorhabditis elegans
Exon55406   136   II: 6963536-6963671 Caenorhabditis elegans
Exon55408   681   II: 6963721-6964401 Caenorhabditis elegans
Exon55410   132   II: 6964456-6964587 Caenorhabditis elegans
Exon55412   113   II: 6964643-6964755 Caenorhabditis elegans
Exon55414   196   II: 6964811-6965006 Caenorhabditis elegans
Exon55416   97   II: 6965057-6965153 Caenorhabditis elegans
Exon55418   113   II: 6965204-6965316 Caenorhabditis elegans
Exon55420   183   II: 6965491-6965673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.3b.1 6958050 6965673 -1

1 Sequence

Length
3529

1 Sequence Ontology Term

Identifier Name Description
transcript