WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E12.2a.2 Sequence Name  C52E12.2a.2
Length (nt)  5173   Chromosome Location  II: 6995932-7010625
Chromosome . Primary Identifier  II Chromosome Location . Start  6995932
Chromosome Location . End  7010625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E12.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006831 unc-104 C52E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E12.2a C52E12.2a 4755   II: 6995934-6996033

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52E12.2a.2 6995932 7010625 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55478   102   II: 6995932-6996033 Caenorhabditis elegans
Exon55482   151   II: 6996558-6996708 Caenorhabditis elegans
Exon55485   169   II: 6996756-6996924 Caenorhabditis elegans
Exon55488   179   II: 6996975-6997153 Caenorhabditis elegans
Exon55494   256   II: 7001721-7001976 Caenorhabditis elegans
Exon55497   161   II: 7002305-7002465 Caenorhabditis elegans
Exon55500   453   II: 7002514-7002966 Caenorhabditis elegans
Exon55506   269   II: 7003394-7003662 Caenorhabditis elegans
Exon55509   155   II: 7003710-7003864 Caenorhabditis elegans
Exon55512   121   II: 7003912-7004032 Caenorhabditis elegans
Exon55515   199   II: 7004303-7004501 Caenorhabditis elegans
Exon55518   132   II: 7004659-7004790 Caenorhabditis elegans
Exon55522   223   II: 7006470-7006692 Caenorhabditis elegans
Exon55525   136   II: 7006843-7006978 Caenorhabditis elegans
Exon55528   121   II: 7007026-7007146 Caenorhabditis elegans
Exon55531   148   II: 7007194-7007341 Caenorhabditis elegans
Exon55534   161   II: 7007388-7007548 Caenorhabditis elegans
Exon55538   635   II: 7007769-7008403 Caenorhabditis elegans
Exon55540   288   II: 7008625-7008912 Caenorhabditis elegans
Exon55543   133   II: 7009153-7009285 Caenorhabditis elegans
Exon55546   445   II: 7009332-7009776 Caenorhabditis elegans
Exon55550   536   II: 7010090-7010625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52E12.2a.2 6995932 7010625 1

1 Sequence

Length
5173

1 Sequence Ontology Term

Identifier Name Description
transcript