WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1127.11.1 Sequence Name  ZK1127.11.1
Length (nt)  2627   Chromosome Location  II: 7065020-7069966
Chromosome . Primary Identifier  II Chromosome Location . Start  7065020
Chromosome Location . End  7069966 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1127.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001872 him-14 ZK1127.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1127.11 ZK1127.11 2529   II: 7065118-7065237

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1127.11.1 7065020 7069966 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55714   218   II: 7065020-7065237 Caenorhabditis elegans
Exon55715   85   II: 7065281-7065365 Caenorhabditis elegans
Exon55716   91   II: 7065415-7065505 Caenorhabditis elegans
Exon55722   83   II: 7066827-7066909 Caenorhabditis elegans
Exon55723   71   II: 7066956-7067026 Caenorhabditis elegans
Exon55724   212   II: 7067072-7067283 Caenorhabditis elegans
Exon55725   142   II: 7067334-7067475 Caenorhabditis elegans
Exon55726   266   II: 7067521-7067786 Caenorhabditis elegans
Exon55727   70   II: 7067832-7067901 Caenorhabditis elegans
Exon55728   122   II: 7067951-7068072 Caenorhabditis elegans
Exon55729   196   II: 7068148-7068343 Caenorhabditis elegans
Exon55730   327   II: 7068394-7068720 Caenorhabditis elegans
Exon55731   66   II: 7068765-7068830 Caenorhabditis elegans
Exon55732   50   II: 7069113-7069162 Caenorhabditis elegans
Exon55733   209   II: 7069209-7069417 Caenorhabditis elegans
Exon55734   104   II: 7069460-7069563 Caenorhabditis elegans
Exon55735   149   II: 7069610-7069758 Caenorhabditis elegans
Exon55736   166   II: 7069801-7069966 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1127.11.1 7065020 7069966 -1

1 Sequence

Length
2627

1 Sequence Ontology Term

Identifier Name Description
transcript