WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F8.3a.1 Sequence Name  T07F8.3a.1
Length (nt)  3564   Chromosome Location  II: 7132643-7137522
Chromosome . Primary Identifier  II Chromosome Location . Start  7132643
Chromosome Location . End  7137522 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001597 gld-3 T07F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F8.3a T07F8.3a 2910   II: 7132643-7132767

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F8.3a.1 7132643 7137522 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55975   125   II: 7132643-7132767 Caenorhabditis elegans
Exon55976   82   II: 7132816-7132897 Caenorhabditis elegans
Exon55978   111   II: 7132939-7133049 Caenorhabditis elegans
Exon55980   71   II: 7133095-7133165 Caenorhabditis elegans
Exon55982   166   II: 7133208-7133373 Caenorhabditis elegans
Exon55984   129   II: 7133418-7133546 Caenorhabditis elegans
Exon55986   120   II: 7133591-7133710 Caenorhabditis elegans
Exon55988   78   II: 7133757-7133834 Caenorhabditis elegans
Exon55990   138   II: 7133879-7134016 Caenorhabditis elegans
Exon55992   243   II: 7134064-7134306 Caenorhabditis elegans
Exon55994   99   II: 7134355-7134453 Caenorhabditis elegans
Exon55996   169   II: 7134502-7134670 Caenorhabditis elegans
Exon55998   123   II: 7134813-7134935 Caenorhabditis elegans
Exon56000   69   II: 7134980-7135048 Caenorhabditis elegans
Exon56002   78   II: 7135384-7135461 Caenorhabditis elegans
Exon56003   240   II: 7135506-7135745 Caenorhabditis elegans
Exon56004   427   II: 7135793-7136219 Caenorhabditis elegans
Exon56005   373   II: 7136339-7136711 Caenorhabditis elegans
Exon56006   49   II: 7136756-7136804 Caenorhabditis elegans
Exon56007   674   II: 7136849-7137522 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F8.3a.1 7132643 7137522 1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
transcript