WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A5.7.1 Sequence Name  F32A5.7.1
Length (nt)  609   Chromosome Location  II: 7252232-7253163
Chromosome . Primary Identifier  II Chromosome Location . Start  7252232
Chromosome Location . End  7253163 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003078 lsm-4 F32A5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A5.7 F32A5.7 372   II: 7252407-7252553

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A5.7.1 7252232 7253163 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56547   322   II: 7252232-7252553 Caenorhabditis elegans
Exon56550   78   II: 7252604-7252681 Caenorhabditis elegans
Exon56551   141   II: 7252913-7253053 Caenorhabditis elegans
Exon56552   68   II: 7253096-7253163 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A5.7.1 7252232 7253163 -1

1 Sequence

Length
609

1 Sequence Ontology Term

Identifier Name Description
transcript