WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30G12.6a.1 Sequence Name  C30G12.6a.1
Length (nt)  3440   Chromosome Location  II: 7292192-7296015
Chromosome . Primary Identifier  II Chromosome Location . Start  7292192
Chromosome Location . End  7296015 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30G12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016277 C30G12.6 C30G12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30G12.6a C30G12.6a 3357   II: 7292275-7292400

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30G12.6a.1 7292192 7296015 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56585   209   II: 7292192-7292400 Caenorhabditis elegans
Exon56586   261   II: 7292442-7292702 Caenorhabditis elegans
Exon56588   355   II: 7292750-7293104 Caenorhabditis elegans
Exon56590   1110   II: 7293162-7294271 Caenorhabditis elegans
Exon56592   161   II: 7294319-7294479 Caenorhabditis elegans
Exon56594   188   II: 7294525-7294712 Caenorhabditis elegans
Exon56596   234   II: 7294765-7294998 Caenorhabditis elegans
Exon56598   639   II: 7295047-7295685 Caenorhabditis elegans
Exon56600   283   II: 7295733-7296015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30G12.6a.1 7292192 7296015 -1

1 Sequence

Length
3440

1 Sequence Ontology Term

Identifier Name Description
transcript