WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D12.1c.1 Sequence Name  F21D12.1c.1
Length (nt)  1536   Chromosome Location  II: 7339229-7349124
Chromosome . Primary Identifier  II Chromosome Location . Start  7339229
Chromosome Location . End  7349124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D12.1c F21D12.1c 1323   II: 7346518-7346601

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1c.1 7339229 7349124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56675   50   II: 7339229-7339278 Caenorhabditis elegans
Exon56682   92   II: 7346510-7346601 Caenorhabditis elegans
Exon56689   121   II: 7346650-7346770 Caenorhabditis elegans
Exon56698   148   II: 7347374-7347521 Caenorhabditis elegans
Exon56705   181   II: 7347571-7347751 Caenorhabditis elegans
Exon56714   264   II: 7347800-7348063 Caenorhabditis elegans
Exon56722   146   II: 7348128-7348273 Caenorhabditis elegans
Exon56731   107   II: 7348324-7348430 Caenorhabditis elegans
Exon56738   161   II: 7348651-7348811 Caenorhabditis elegans
Exon56747   266   II: 7348859-7349124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1c.1 7339229 7349124 1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
transcript