WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F21D12.1c Sequence Name  F21D12.1c
Length (nt)  1323   Chromosome Location  II: 7346518-7346601
Chromosome . Primary Identifier  II Chromosome Location . Start  7346518
Chromosome Location . End  7346601
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33377 NHR-21, isoform c 49.1 440 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00045185
WBRNAi00045186
WBRNAi00013666
WBRNAi00031212
WBRNAi00107170

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F21D12.1c 7346518 7346601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F21D12.1c 7346518 7346601 1
CDS:F21D12.1c 7346650 7346770 1
CDS:F21D12.1c 7347374 7347521 1
CDS:F21D12.1c 7347571 7347751 1
CDS:F21D12.1c 7347800 7348063 1
CDS:F21D12.1c 7348128 7348273 1
CDS:F21D12.1c 7348324 7348430 1
CDS:F21D12.1c 7348651 7348811 1
CDS:F21D12.1c 7348859 7348969 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F21D12.1c.1 F21D12.1c.1 1536   II: 7339229-7349124
Transcript:F21D12.1c.3 F21D12.1c.3 3118   II: 7339555-7349124
Transcript:F21D12.1c.4 F21D12.1c.4 1559   II: 7345351-7349124
Transcript:F21D12.1c.2 F21D12.1c.2 1480   II: 7346510-7349118