WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D12.1c.3 Sequence Name  F21D12.1c.3
Length (nt)  3118   Chromosome Location  II: 7339555-7349124
Chromosome . Primary Identifier  II Chromosome Location . Start  7339555
Chromosome Location . End  7349124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.1c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D12.1c F21D12.1c 1323   II: 7346518-7346601

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1c.3 7339555 7349124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56678   1632   II: 7339555-7341186 Caenorhabditis elegans
Exon56683   92   II: 7346510-7346601 Caenorhabditis elegans
Exon56691   121   II: 7346650-7346770 Caenorhabditis elegans
Exon56700   148   II: 7347374-7347521 Caenorhabditis elegans
Exon56707   181   II: 7347571-7347751 Caenorhabditis elegans
Exon56716   264   II: 7347800-7348063 Caenorhabditis elegans
Exon56724   146   II: 7348128-7348273 Caenorhabditis elegans
Exon56733   107   II: 7348324-7348430 Caenorhabditis elegans
Exon56740   161   II: 7348651-7348811 Caenorhabditis elegans
Exon56748   266   II: 7348859-7349124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1c.3 7339555 7349124 1

1 Sequence

Length
3118

1 Sequence Ontology Term

Identifier Name Description
transcript