WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D12.5.1 Sequence Name  F21D12.5.1
Length (nt)  685   Chromosome Location  II: 7328736-7331324
Chromosome . Primary Identifier  II Chromosome Location . Start  7328736
Chromosome Location . End  7331324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017664 npax-1 F21D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D12.5 F21D12.5 531   II: 7328890-7328950

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.5.1 7328736 7331324 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56706   215   II: 7328736-7328950 Caenorhabditis elegans
Exon56707   138   II: 7328998-7329135 Caenorhabditis elegans
Exon56708   163   II: 7330016-7330178 Caenorhabditis elegans
Exon56709   94   II: 7330302-7330395 Caenorhabditis elegans
Exon56710   75   II: 7331250-7331324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.5.1 7328736 7331324 -1

1 Sequence

Length
685

1 Sequence Ontology Term

Identifier Name Description
transcript