WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D12.1e.1 Sequence Name  F21D12.1e.1
Length (nt)  1534   Chromosome Location  II: 7339229-7349116
Chromosome . Primary Identifier  II Chromosome Location . Start  7339229
Chromosome Location . End  7349116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D12.1e F21D12.1e 1353   II: 7339263-7339278

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1e.1 7339229 7349116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56711   50   II: 7339229-7339278 Caenorhabditis elegans
Exon56723   92   II: 7346510-7346601 Caenorhabditis elegans
Exon56731   121   II: 7346650-7346770 Caenorhabditis elegans
Exon56740   154   II: 7347374-7347527 Caenorhabditis elegans
Exon56748   175   II: 7347577-7347751 Caenorhabditis elegans
Exon56756   264   II: 7347800-7348063 Caenorhabditis elegans
Exon56764   146   II: 7348128-7348273 Caenorhabditis elegans
Exon56766   113   II: 7348318-7348430 Caenorhabditis elegans
Exon56780   161   II: 7348651-7348811 Caenorhabditis elegans
Exon56781   258   II: 7348859-7349116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1e.1 7339229 7349116 1

1 Sequence

Length
1534

1 Sequence Ontology Term

Identifier Name Description
transcript