WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.8a.2 Sequence Name  F43E2.8a.2
Length (nt)  2232   Chromosome Location  II: 7350112-7352645
Chromosome . Primary Identifier  II Chromosome Location . Start  7350112
Chromosome Location . End  7352645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002008 hsp-4 F43E2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.8a F43E2.8a 1974   II: 7350260-7350364

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.8a.2 7350112 7352645 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56752   253   II: 7350112-7350364 Caenorhabditis elegans
Exon56756   704   II: 7350414-7351117 Caenorhabditis elegans
Exon56760   235   II: 7351164-7351398 Caenorhabditis elegans
Exon56762   567   II: 7351448-7352014 Caenorhabditis elegans
Exon56764   185   II: 7352064-7352248 Caenorhabditis elegans
Exon56766   222   II: 7352297-7352518 Caenorhabditis elegans
Exon56767   66   II: 7352580-7352645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.8a.2 7350112 7352645 -1

1 Sequence

Length
2232

1 Sequence Ontology Term

Identifier Name Description
transcript