WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43E2.8a Sequence Name  F43E2.8a
Length (nt)  1974   Chromosome Location  II: 7350260-7350364
Chromosome . Primary Identifier  II Chromosome Location . Start  7350260
Chromosome Location . End  7350364
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07244 HSP-4, isoform a 72.3 657 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00095620
WBRNAi00113924
WBRNAi00106311
WBRNAi00085799
WBRNAi00073090
WBRNAi00047204
WBRNAi00032190
WBRNAi00113921
WBRNAi00076421
WBRNAi00077199
WBRNAi00073089
WBRNAi00073091
WBRNAi00025491
WBRNAi00079998
WBRNAi00108636
WBRNAi00108561
WBRNAi00087884
WBRNAi00096851
WBRNAi00087881
WBRNAi00079997
WBRNAi00094842
WBRNAi00065368
WBRNAi00094871
WBRNAi00090577
WBRNAi00108735
WBRNAi00108745

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43E2.8a 7350260 7350364 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002008 hsp-4 F43E2.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43E2.8a 7350260 7350364 -1
CDS:F43E2.8a 7350414 7351117 -1
CDS:F43E2.8a 7351164 7351398 -1
CDS:F43E2.8a 7351448 7352014 -1
CDS:F43E2.8a 7352064 7352248 -1
CDS:F43E2.8a 7352297 7352474 -1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43E2.8a.2 F43E2.8a.2 2232   II: 7350112-7352645
Transcript:F43E2.8a.1 F43E2.8a.1 2166   II: 7350112-7352518