WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.3a.1 Sequence Name  F43E2.3a.1
Length (nt)  2241   Chromosome Location  II: 7358893-7363247
Chromosome . Primary Identifier  II Chromosome Location . Start  7358893
Chromosome Location . End  7363247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.3a F43E2.3a 1896   II: 7359961-7360051

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.1 7358893 7363247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56775   95   II: 7358893-7358987 Caenorhabditis elegans
Exon56777   170   II: 7359199-7359368 Caenorhabditis elegans
Exon56781   98   II: 7359954-7360051 Caenorhabditis elegans
Exon56784   111   II: 7360097-7360207 Caenorhabditis elegans
Exon56788   41   II: 7360587-7360627 Caenorhabditis elegans
Exon56792   145   II: 7360741-7360885 Caenorhabditis elegans
Exon56796   115   II: 7360938-7361052 Caenorhabditis elegans
Exon56800   191   II: 7361105-7361295 Caenorhabditis elegans
Exon56804   95   II: 7361343-7361437 Caenorhabditis elegans
Exon56808   101   II: 7361483-7361583 Caenorhabditis elegans
Exon56812   100   II: 7361632-7361731 Caenorhabditis elegans
Exon56816   246   II: 7361783-7362028 Caenorhabditis elegans
Exon56820   154   II: 7362110-7362263 Caenorhabditis elegans
Exon56824   103   II: 7362311-7362413 Caenorhabditis elegans
Exon56828   281   II: 7362724-7363004 Caenorhabditis elegans
Exon56833   195   II: 7363053-7363247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.1 7358893 7363247 1

1 Sequence

Length
2241

1 Sequence Ontology Term

Identifier Name Description
transcript