WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43E2.3a Sequence Name  F43E2.3a
Length (nt)  1896   Chromosome Location  II: 7359961-7360051
Chromosome . Primary Identifier  II Chromosome Location . Start  7359961
Chromosome Location . End  7360051
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39370 INSC-1, isoform a 69.4 631 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047197
WBRNAi00014882
WBRNAi00032187

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43E2.3a 7359961 7360051 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43E2.3a 7359961 7360051 1
CDS:F43E2.3a 7360097 7360207 1
CDS:F43E2.3a 7360587 7360627 1
CDS:F43E2.3a 7360741 7360885 1
CDS:F43E2.3a 7360938 7361052 1
CDS:F43E2.3a 7361105 7361295 1
CDS:F43E2.3a 7361343 7361437 1
CDS:F43E2.3a 7361483 7361583 1
CDS:F43E2.3a 7361632 7361731 1
CDS:F43E2.3a 7361783 7362028 1
CDS:F43E2.3a 7362110 7362263 1
CDS:F43E2.3a 7362311 7362413 1
CDS:F43E2.3a 7362724 7363004 1
CDS:F43E2.3a 7363053 7363174 1

1 Sequence

Length
1896

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43E2.3a.1 F43E2.3a.1 2241   II: 7358893-7363247
Transcript:F43E2.3a.2 F43E2.3a.2 2067   II: 7359819-7363260
Transcript:F43E2.3a.3 F43E2.3a.3 1984   II: 7359951-7363252