WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.3a.2 Sequence Name  F43E2.3a.2
Length (nt)  2067   Chromosome Location  II: 7359819-7363260
Chromosome . Primary Identifier  II Chromosome Location . Start  7359819
Chromosome Location . End  7363260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.3a F43E2.3a 1896   II: 7359961-7360051

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.2 7359819 7363260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56779   78   II: 7359819-7359896 Caenorhabditis elegans
Exon56782   98   II: 7359954-7360051 Caenorhabditis elegans
Exon56785   111   II: 7360097-7360207 Caenorhabditis elegans
Exon56789   41   II: 7360587-7360627 Caenorhabditis elegans
Exon56793   145   II: 7360741-7360885 Caenorhabditis elegans
Exon56797   115   II: 7360938-7361052 Caenorhabditis elegans
Exon56801   191   II: 7361105-7361295 Caenorhabditis elegans
Exon56805   95   II: 7361343-7361437 Caenorhabditis elegans
Exon56809   101   II: 7361483-7361583 Caenorhabditis elegans
Exon56813   100   II: 7361632-7361731 Caenorhabditis elegans
Exon56817   246   II: 7361783-7362028 Caenorhabditis elegans
Exon56821   154   II: 7362110-7362263 Caenorhabditis elegans
Exon56825   103   II: 7362311-7362413 Caenorhabditis elegans
Exon56829   281   II: 7362724-7363004 Caenorhabditis elegans
Exon56835   208   II: 7363053-7363260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.2 7359819 7363260 1

1 Sequence

Length
2067

1 Sequence Ontology Term

Identifier Name Description
transcript