WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.3a.3 Sequence Name  F43E2.3a.3
Length (nt)  1984   Chromosome Location  II: 7359951-7363252
Chromosome . Primary Identifier  II Chromosome Location . Start  7359951
Chromosome Location . End  7363252 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.3a F43E2.3a 1896   II: 7359961-7360051

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.3 7359951 7363252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56780   101   II: 7359951-7360051 Caenorhabditis elegans
Exon56786   111   II: 7360097-7360207 Caenorhabditis elegans
Exon56790   41   II: 7360587-7360627 Caenorhabditis elegans
Exon56794   145   II: 7360741-7360885 Caenorhabditis elegans
Exon56798   115   II: 7360938-7361052 Caenorhabditis elegans
Exon56802   191   II: 7361105-7361295 Caenorhabditis elegans
Exon56806   95   II: 7361343-7361437 Caenorhabditis elegans
Exon56810   101   II: 7361483-7361583 Caenorhabditis elegans
Exon56814   100   II: 7361632-7361731 Caenorhabditis elegans
Exon56818   246   II: 7361783-7362028 Caenorhabditis elegans
Exon56822   154   II: 7362110-7362263 Caenorhabditis elegans
Exon56826   103   II: 7362311-7362413 Caenorhabditis elegans
Exon56830   281   II: 7362724-7363004 Caenorhabditis elegans
Exon56834   200   II: 7363053-7363252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.3 7359951 7363252 1

1 Sequence

Length
1984

1 Sequence Ontology Term

Identifier Name Description
transcript