WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.3a.3 Sequence Name  F43E2.3a.3
Length (nt)  1984   Chromosome Location  II: 7359951-7363252
Chromosome . Primary Identifier  II Chromosome Location . Start  7359951
Chromosome Location . End  7363252 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.3a F43E2.3a 1896   II: 7359961-7360051

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.3 7359951 7363252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56817   101   II: 7359951-7360051 Caenorhabditis elegans
Exon56823   111   II: 7360097-7360207 Caenorhabditis elegans
Exon56827   41   II: 7360587-7360627 Caenorhabditis elegans
Exon56831   145   II: 7360741-7360885 Caenorhabditis elegans
Exon56835   115   II: 7360938-7361052 Caenorhabditis elegans
Exon56839   191   II: 7361105-7361295 Caenorhabditis elegans
Exon56843   95   II: 7361343-7361437 Caenorhabditis elegans
Exon56847   101   II: 7361483-7361583 Caenorhabditis elegans
Exon56851   100   II: 7361632-7361731 Caenorhabditis elegans
Exon56855   246   II: 7361783-7362028 Caenorhabditis elegans
Exon56859   154   II: 7362110-7362263 Caenorhabditis elegans
Exon56863   103   II: 7362311-7362413 Caenorhabditis elegans
Exon56867   281   II: 7362724-7363004 Caenorhabditis elegans
Exon56871   200   II: 7363053-7363252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3a.3 7359951 7363252 1

1 Sequence

Length
1984

1 Sequence Ontology Term

Identifier Name Description
transcript