WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07D10.2a.1 Sequence Name  C07D10.2a.1
Length (nt)  1719   Chromosome Location  II: 7394955-7397351
Chromosome . Primary Identifier  II Chromosome Location . Start  7394955
Chromosome Location . End  7397351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07D10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015567 bath-44 C07D10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07D10.2a C07D10.2a 1173   II: 7394958-7395034

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07D10.2a.1 7394955 7397351 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56939   80   II: 7394955-7395034 Caenorhabditis elegans
Exon56940   79   II: 7395210-7395288 Caenorhabditis elegans
Exon56943   123   II: 7395414-7395536 Caenorhabditis elegans
Exon56944   120   II: 7395582-7395701 Caenorhabditis elegans
Exon56946   113   II: 7395752-7395864 Caenorhabditis elegans
Exon56948   370   II: 7395911-7396280 Caenorhabditis elegans
Exon56950   129   II: 7396345-7396473 Caenorhabditis elegans
Exon56952   115   II: 7396523-7396637 Caenorhabditis elegans
Exon56955   590   II: 7396762-7397351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07D10.2a.1 7394955 7397351 1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
transcript