WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02A2.3a.1 Sequence Name  K02A2.3a.1
Length (nt)  3376   Chromosome Location  II: 7425939-7431390
Chromosome . Primary Identifier  II Chromosome Location . Start  7425939
Chromosome Location . End  7431390 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02A2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019289 kcc-3 K02A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02A2.3a K02A2.3a 3213   II: 7426084-7426170

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02A2.3a.1 7425939 7431390 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56979   232   II: 7425939-7426170 Caenorhabditis elegans
Exon56981   199   II: 7426216-7426414 Caenorhabditis elegans
Exon56983   251   II: 7426751-7427001 Caenorhabditis elegans
Exon56985   290   II: 7427078-7427367 Caenorhabditis elegans
Exon56987   280   II: 7427410-7427689 Caenorhabditis elegans
Exon56989   199   II: 7427766-7427964 Caenorhabditis elegans
Exon56991   120   II: 7428017-7428136 Caenorhabditis elegans
Exon56993   274   II: 7428180-7428453 Caenorhabditis elegans
Exon56996   548   II: 7428696-7429243 Caenorhabditis elegans
Exon56998   123   II: 7429293-7429415 Caenorhabditis elegans
Exon57000   434   II: 7429461-7429894 Caenorhabditis elegans
Exon57003   144   II: 7429943-7430086 Caenorhabditis elegans
Exon57005   185   II: 7430152-7430336 Caenorhabditis elegans
Exon57007   65   II: 7430398-7430462 Caenorhabditis elegans
Exon57009   32   II: 7431359-7431390 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02A2.3a.1 7425939 7431390 -1

1 Sequence

Length
3376

1 Sequence Ontology Term

Identifier Name Description
transcript