WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02A2.3b.1 Sequence Name  K02A2.3b.1
Length (nt)  3246   Chromosome Location  II: 7426084-7434282
Chromosome . Primary Identifier  II Chromosome Location . Start  7426084
Chromosome Location . End  7434282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02A2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019289 kcc-3 K02A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02A2.3b K02A2.3b 3246   II: 7426084-7426170

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02A2.3b.1 7426084 7434282 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56980   87   II: 7426084-7426170 Caenorhabditis elegans
Exon56982   199   II: 7426216-7426414 Caenorhabditis elegans
Exon56984   251   II: 7426751-7427001 Caenorhabditis elegans
Exon56986   290   II: 7427078-7427367 Caenorhabditis elegans
Exon56988   280   II: 7427410-7427689 Caenorhabditis elegans
Exon56990   199   II: 7427766-7427964 Caenorhabditis elegans
Exon56992   120   II: 7428017-7428136 Caenorhabditis elegans
Exon56994   274   II: 7428180-7428453 Caenorhabditis elegans
Exon56997   548   II: 7428696-7429243 Caenorhabditis elegans
Exon56999   123   II: 7429293-7429415 Caenorhabditis elegans
Exon57001   434   II: 7429461-7429894 Caenorhabditis elegans
Exon57004   144   II: 7429943-7430086 Caenorhabditis elegans
Exon57006   185   II: 7430152-7430336 Caenorhabditis elegans
Exon57008   65   II: 7430398-7430462 Caenorhabditis elegans
Exon57010   32   II: 7431359-7431390 Caenorhabditis elegans
Exon57016   15   II: 7434268-7434282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02A2.3b.1 7426084 7434282 -1

1 Sequence

Length
3246

1 Sequence Ontology Term

Identifier Name Description
transcript