WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1022.7a.1 Sequence Name  D1022.7a.1
Length (nt)  4264   Chromosome Location  II: 7472732-7478537
Chromosome . Primary Identifier  II Chromosome Location . Start  7472732
Chromosome Location . End  7478537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1022.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000101 aka-1 D1022.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1022.7a D1022.7a 3843   II: 7473148-7473246

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D1022.7a.1 7472732 7478537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57067   515   II: 7472732-7473246 Caenorhabditis elegans
Exon57068   109   II: 7473292-7473400 Caenorhabditis elegans
Exon57070   78   II: 7473451-7473528 Caenorhabditis elegans
Exon57072   149   II: 7473574-7473722 Caenorhabditis elegans
Exon57074   260   II: 7473773-7474032 Caenorhabditis elegans
Exon57076   70   II: 7474080-7474149 Caenorhabditis elegans
Exon57078   78   II: 7474198-7474275 Caenorhabditis elegans
Exon57080   191   II: 7474322-7474512 Caenorhabditis elegans
Exon57082   265   II: 7474568-7474832 Caenorhabditis elegans
Exon57084   188   II: 7475643-7475830 Caenorhabditis elegans
Exon57086   232   II: 7475882-7476113 Caenorhabditis elegans
Exon57088   478   II: 7476159-7476636 Caenorhabditis elegans
Exon57094   152   II: 7476694-7476845 Caenorhabditis elegans
Exon57095   171   II: 7476890-7477060 Caenorhabditis elegans
Exon57098   846   II: 7477110-7477955 Caenorhabditis elegans
Exon57101   270   II: 7478005-7478274 Caenorhabditis elegans
Exon57105   212   II: 7478326-7478537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D1022.7a.1 7472732 7478537 -1

1 Sequence

Length
4264

1 Sequence Ontology Term

Identifier Name Description
transcript