WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1022.9a.1 Sequence Name  D1022.9a.1
Length (nt)  1163   Chromosome Location  II: 7488129-7489705
Chromosome . Primary Identifier  II Chromosome Location . Start  7488129
Chromosome Location . End  7489705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1022.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044300 D1022.9 D1022.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1022.9a D1022.9a 1059   II: 7488242-7488404

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1022.9a.1 7488129 7489705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57131   57   II: 7488129-7488185 Caenorhabditis elegans
Exon57132   166   II: 7488239-7488404 Caenorhabditis elegans
Exon57134   337   II: 7488458-7488794 Caenorhabditis elegans
Exon57136   181   II: 7488839-7489019 Caenorhabditis elegans
Exon57138   234   II: 7489094-7489327 Caenorhabditis elegans
Exon57140   97   II: 7489374-7489470 Caenorhabditis elegans
Exon57142   91   II: 7489615-7489705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1022.9a.1 7488129 7489705 -1

1 Sequence

Length
1163

1 Sequence Ontology Term

Identifier Name Description
transcript