WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1290.10.1 Sequence Name  ZK1290.10.1
Length (nt)  1455   Chromosome Location  II: 7551941-7553906
Chromosome . Primary Identifier  II Chromosome Location . Start  7551941
Chromosome Location . End  7553906 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1290.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022891 ZK1290.10 ZK1290.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1290.10 ZK1290.10 1239   II: 7552054-7552143

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1290.10.1 7551941 7553906 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57395   203   II: 7551941-7552143 Caenorhabditis elegans
Exon57396   59   II: 7552196-7552254 Caenorhabditis elegans
Exon57397   144   II: 7552309-7552452 Caenorhabditis elegans
Exon57398   156   II: 7552610-7552765 Caenorhabditis elegans
Exon57399   144   II: 7552809-7552952 Caenorhabditis elegans
Exon57400   172   II: 7553011-7553182 Caenorhabditis elegans
Exon57401   332   II: 7553229-7553560 Caenorhabditis elegans
Exon57402   75   II: 7553610-7553684 Caenorhabditis elegans
Exon57403   170   II: 7553737-7553906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1290.10.1 7551941 7553906 -1

1 Sequence

Length
1455

1 Sequence Ontology Term

Identifier Name Description
transcript