WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07G3.1 Sequence Name  R07G3.1
Length (nt)  576   Chromosome Location  II: 7616457-7616579
Chromosome . Primary Identifier  II Chromosome Location . Start  7616457
Chromosome Location . End  7616579
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07G3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02020 CDC-42 21.1 191 Caenorhabditis elegans
 

Other

73 RNAi

WormBase ID
WBRNAi00107896
WBRNAi00078512
WBRNAi00078510
WBRNAi00086069
WBRNAi00091306
WBRNAi00107681
WBRNAi00062774
WBRNAi00062775
WBRNAi00101882
WBRNAi00009047
WBRNAi00051498
WBRNAi00026057
WBRNAi00061131
WBRNAi00091303
WBRNAi00034721
WBRNAi00068319
WBRNAi00068318
WBRNAi00068321
WBRNAi00068320
WBRNAi00064511
WBRNAi00064641
WBRNAi00064702
WBRNAi00064793
WBRNAi00068831
WBRNAi00068830
WBRNAi00071920
WBRNAi00071922
WBRNAi00071924
WBRNAi00065667
WBRNAi00071854

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07G3.1 7616457 7616579 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000390 cdc-42 R07G3.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07G3.1 7616457 7616579 1
CDS:R07G3.1 7616633 7616797 1
CDS:R07G3.1 7616848 7617045 1
CDS:R07G3.1 7617391 7617480 1

1 Sequence

Length
576

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07G3.1.1 R07G3.1.1 1346   II: 7616452-7618245