WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0495.4.1 Sequence Name  B0495.4.1
Length (nt)  2054   Chromosome Location  II: 7690711-7693957
Chromosome . Primary Identifier  II Chromosome Location . Start  7690711
Chromosome Location . End  7693957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0495.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003730 nhx-2 B0495.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0495.4 B0495.4 1935   II: 7690820-7691048

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0495.4.1 7690711 7693957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57916   338   II: 7690711-7691048 Caenorhabditis elegans
Exon57917   110   II: 7691096-7691205 Caenorhabditis elegans
Exon57918   168   II: 7691253-7691420 Caenorhabditis elegans
Exon57919   90   II: 7691464-7691553 Caenorhabditis elegans
Exon57920   144   II: 7691728-7691871 Caenorhabditis elegans
Exon57921   274   II: 7691923-7692196 Caenorhabditis elegans
Exon57922   326   II: 7692424-7692749 Caenorhabditis elegans
Exon57923   134   II: 7692798-7692931 Caenorhabditis elegans
Exon57924   267   II: 7693183-7693449 Caenorhabditis elegans
Exon57925   203   II: 7693755-7693957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0495.4.1 7690711 7693957 -1

1 Sequence

Length
2054

1 Sequence Ontology Term

Identifier Name Description
transcript