WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0495.2b.1 Sequence Name  B0495.2b.1
Length (nt)  2284   Chromosome Location  II: 7699235-7702006
Chromosome . Primary Identifier  II Chromosome Location . Start  7699235
Chromosome Location . End  7702006 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0495.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015203 cdk-11.1 B0495.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0495.2b B0495.2b 2130   II: 7699313-7699346

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0495.2b.1 7699235 7702006 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57943   112   II: 7699235-7699346 Caenorhabditis elegans
Exon57946   51   II: 7699421-7699471 Caenorhabditis elegans
Exon57948   113   II: 7699517-7699629 Caenorhabditis elegans
Exon57950   124   II: 7699677-7699800 Caenorhabditis elegans
Exon57952   166   II: 7699844-7700009 Caenorhabditis elegans
Exon57954   92   II: 7700063-7700154 Caenorhabditis elegans
Exon57956   219   II: 7700205-7700423 Caenorhabditis elegans
Exon57958   1048   II: 7700493-7701540 Caenorhabditis elegans
Exon57960   66   II: 7701594-7701659 Caenorhabditis elegans
Exon57961   293   II: 7701714-7702006 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0495.2b.1 7699235 7702006 1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript