WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0495.10a.1 Sequence Name  B0495.10a.1
Length (nt)  2300   Chromosome Location  II: 7711905-7718591
Chromosome . Primary Identifier  II Chromosome Location . Start  7711905
Chromosome Location . End  7718591 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0495.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007044 cpna-5 B0495.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0495.10a B0495.10a 2154   II: 7712047-7712118

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0495.10a.1 7711905 7718591 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58017   214   II: 7711905-7712118 Caenorhabditis elegans
Exon58020   125   II: 7712192-7712316 Caenorhabditis elegans
Exon58021   184   II: 7712367-7712550 Caenorhabditis elegans
Exon58023   282   II: 7712599-7712880 Caenorhabditis elegans
Exon58026   207   II: 7712937-7713143 Caenorhabditis elegans
Exon58029   76   II: 7713188-7713263 Caenorhabditis elegans
Exon58032   135   II: 7713352-7713486 Caenorhabditis elegans
Exon58035   83   II: 7713538-7713620 Caenorhabditis elegans
Exon58038   288   II: 7713674-7713961 Caenorhabditis elegans
Exon58041   490   II: 7714040-7714529 Caenorhabditis elegans
Exon58044   114   II: 7714630-7714743 Caenorhabditis elegans
Exon58053   102   II: 7718490-7718591 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0495.10a.1 7711905 7718591 -1

1 Sequence

Length
2300

1 Sequence Ontology Term

Identifier Name Description
transcript