WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0495.10c.1 Sequence Name  B0495.10c.1
Length (nt)  2402   Chromosome Location  II: 7711922-7718587
Chromosome . Primary Identifier  II Chromosome Location . Start  7711922
Chromosome Location . End  7718587 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0495.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007044 cpna-5 B0495.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0495.10c B0495.10c 1986   II: 7712338-7712550

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0495.10c.1 7711922 7718587 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58018   629   II: 7711922-7712550 Caenorhabditis elegans
Exon58025   282   II: 7712599-7712880 Caenorhabditis elegans
Exon58028   207   II: 7712937-7713143 Caenorhabditis elegans
Exon58031   76   II: 7713188-7713263 Caenorhabditis elegans
Exon58034   135   II: 7713352-7713486 Caenorhabditis elegans
Exon58037   83   II: 7713538-7713620 Caenorhabditis elegans
Exon58040   288   II: 7713674-7713961 Caenorhabditis elegans
Exon58043   490   II: 7714040-7714529 Caenorhabditis elegans
Exon58046   114   II: 7714630-7714743 Caenorhabditis elegans
Exon58052   98   II: 7718490-7718587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0495.10c.1 7711922 7718587 -1

1 Sequence

Length
2402

1 Sequence Ontology Term

Identifier Name Description
transcript