WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A8.8e.1 Sequence Name  C06A8.8e.1
Length (nt)  891   Chromosome Location  II: 7765848-7769754
Chromosome . Primary Identifier  II Chromosome Location . Start  7765848
Chromosome Location . End  7769754 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A8.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015517 cepr-104.2 C06A8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A8.8e C06A8.8e 891   II: 7765848-7765871

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.8e.1 7765848 7769754 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58149   24   II: 7765848-7765871 Caenorhabditis elegans
Exon58151   79   II: 7765918-7765996 Caenorhabditis elegans
Exon58155   126   II: 7766045-7766170 Caenorhabditis elegans
Exon58159   86   II: 7766213-7766298 Caenorhabditis elegans
Exon58163   73   II: 7766682-7766754 Caenorhabditis elegans
Exon58171   59   II: 7767062-7767120 Caenorhabditis elegans
Exon58178   75   II: 7767545-7767619 Caenorhabditis elegans
Exon58187   117   II: 7767666-7767782 Caenorhabditis elegans
Exon58194   107   II: 7769341-7769447 Caenorhabditis elegans
Exon58196   145   II: 7769610-7769754 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.8e.1 7765848 7769754 -1

1 Sequence

Length
891

1 Sequence Ontology Term

Identifier Name Description
transcript